The Resource Molecular evolution : computer analysis of protein and nucleic acid sequences, edited by Russell F. Doolittle, (electronic resource)

Molecular evolution : computer analysis of protein and nucleic acid sequences, edited by Russell F. Doolittle, (electronic resource)

Label
Molecular evolution : computer analysis of protein and nucleic acid sequences
Title
Molecular evolution
Title remainder
computer analysis of protein and nucleic acid sequences
Statement of responsibility
edited by Russell F. Doolittle
Contributor
Subject
Language
eng
Summary
This volume addresses a variety of areas in which computers are used to manage and manipulate nucleic acid and protein sequence data. The manipulations include searching, aligning, and determining the significance of similarities, as well as the construction of phylogenetic trees that show the evolutionary history of related sequences. Ready-to-use methods for the "at-the-bench" scientist are presented
Member of
Cataloging source
OCLCE
Dewey number
575
Index
no index present
LC call number
QP601
LC item number
.C733 v.183
Literary form
non fiction
Nature of contents
dictionaries
Series statement
Methods in enzymology
Series volume
v. 183
Label
Molecular evolution : computer analysis of protein and nucleic acid sequences, edited by Russell F. Doolittle, (electronic resource)
Publication
Note
Includes indexes
Bibliography note
Includes bibliographical references
http://library.link/vocab/branchCode
  • net
Contents
  • Rapid and sensitive sequence comparison with FASTP and FASTA
  • William R. Pearson
  • Searching through sequence databases
  • Russell F. Doolittle
  • Finding protein similarities with nucleotide sequence databases
  • Steven Henikoff, James C. Wallace and Joseph P. Brown
  • Use of homology domains in sequence similarity detection
  • Charles B. Lawrence
  • Profile analysis
  • Michael Gribskov, Roland Lothy and David Eisenberg
  • GenBank: Current status and future directions
  • Finding protein coding regions in genomic sequences
  • Rodger Staden
  • Ancient patterns in nucleic acid sequences
  • John C. W. Shepherd
  • Searching for patterns in protein and nucleic acid sequences
  • Rodger Staden
  • Consensus patterns in DNA
  • Gary D. Stormo
  • Consensus methods for DNA and protein sequence alignment
  • Michael S. Waterman and Robert Jones
  • Christian Burks ... [et al.]
  • k-tuple frequency analysis: From intron/exon discrimination to T-cell epitope mapping
  • Jean-Michel Claverie, Isabelle Sauvaget and Lydie Bougueleret
  • Splice junctions, branch point sites, and exons: Sequence statistics, identification, and applications to genome project
  • Periannan Senapathy, Marvin B. Shapiro and Nomi L. Harris
  • Predicting optimal and suboptimal secondary structure for RNA
  • John A. Jaeger, Douglas H. Turner and Michael Zuker
  • Detecting pseudoknots and other local base-pairing structures in RNA sequences
  • Hugo M. Martinez
  • Computer modeling and display of RNA secondary and tertiary structures
  • Daniel Gautheret, Fran├žois Major and Robert Cedergren --
  • EMBL Data Library
  • Patricia Kahn and Graham Cameron
  • Protein Sequence Database
  • Winona C. Barker, David G. George and Lois T. Hunt
  • Cooperation between databases and scientific community
  • Borivoj Keil
  • Identification of significant sequence patterns in proteins
  • Samuel Karlin, B. Edwin Blaisdell and Volker Brendel
  • Protein multiple sequence alignment and flexible pattern matching
  • Geoffrey J. Barton
  • Genomic divergence through gene rearrangement
  • David Sankoff, Robert Cedergren and Yvon Abel
  • Multiple sequence comparison
  • David J. Bacon and Wayne F. Anderson
  • Simultaneous comparison of several sequences
  • Mauno Vihinen
  • Mutation data matrix and its uses
  • Hierarchical method to align large numbers of biological sequences
  • William R. Taylor
  • Significance of protein sequence similarities
  • John F. Collins and Andrew F. W. Coulson
  • Fast alignment of DNA and protein sequences
  • Gad M. Landau, Uzi Vishkin and Ruth Nussinov
  • Statistical geometry on sequence space
  • Manfred Eigen and Ruthild Winkler-Oswatitsch
  • Statistical methods for estimating sequence divergence
  • Takashi Gojobori, Etsuko N. Moriyama and Motoo Kimura
  • David G. George, Winona C. Barker and Lois T. Hunt
  • Converting distance to time: Application to human evolution
  • Hirohisa Kishino and Masami Hasegawa--
  • Influence of base composition on quantitative estimates of gene evolution
  • Cecilia Saccone ... [et al.]
  • Maximum likelihood methods
  • Naruya Saitou
  • Maximum parsimony approach to construction of evolutionary trees from aligned homologous sequences
  • John Czelusniak ... [et al.]
  • Phylogeny determination using dynamically weighted parsimony method
  • Patrick L. Williams and Walter M. Fitch--
  • Sensitivity comparison of protein amino acid sequences
  • Unified approach to alignment and phylogenies
  • Jotun Hein
  • Statistical tests of molecular phylogenies
  • Wen-Hsiung Li and Manolo Gouy
  • Nearest neighbor procedure for relating progressively aligned amino acid sequences
  • Russell F. Doolittle and Da-Fei Feng
  • Phylogenetic relationships from three-dimensional protein structures
  • Mark S. Johnson, Andrej Sali and Tom L. Blundell
  • Patrick Argos and Martin Vingron
  • Three-way Needleman--Wunsch algorithm
  • Mitsuo Murata
  • Progressive alignment and phylogenetic tree construction of protein sequences
  • Da-Fei Feng and Russell F. Doolittle
Control code
ocn761159067
Dimensions
unknown
Extent
1 online resource (xxix, 736 p.)
File format
one file format
Form of item
online
Isbn
9780121820848
Other physical details
ill
http://library.link/vocab/recordID
.b29952621
Specific material designation
remote
System control number
  • (OCoLC)761159067
  • sciencedirect012182084X

Library Locations

    • Deakin University Library - Geelong Waurn Ponds CampusBorrow it
      75 Pigdons Road, Waurn Ponds, Victoria, 3216, AU
      -38.195656 144.304955
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